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文章:

构建T细胞受体相关基因特征用于头颈部鳞状细胞癌的预后分层与治疗指导

Constructing a T-Cell Receptor-Related Gene Signature for Prognostic Stratification and Therapeutic Guidance in Head and Neck Squamous Cell Carcinoma

原文发布日期:21 November 2023

DOI: 10.3390/cancers15235495

类型: Article

开放获取: 是

 

英文摘要:

Backgroud: The stratification of head and neck squamous cell carcinoma (HNSCC) patients based on prognostic differences is critical for therapeutic guidance. This study was designed to construct a predictive signature derived from T-cell receptor-related genes (TCRRGs) to forecast the clinical outcomes in HNSCC. Methods: We sourced gene expression profiles from The Cancer Genome Atlas (TCGA) HNSCC dataset, GSE41613, and GSE65858 datasets. Utilizing consensus clustering analysis, we identified two distinct HNSCC clusters according to TCRRG expression. A TCRRG-based signature was subsequently developed and validated across diverse independent HNSCC cohorts. Moreover, we established a nomogram model based on TCRRGs. We further explored differences in immune landscapes between high- and low-risk groups. Results: The TCGA HNSCC dataset was stratified into two clusters, displaying marked variations in both overall survival (OS) and immune cell infiltration. Furthermore, we developed a robust prognostic signature based on TCRRG utilizing the TCGA HNSCC train cohort, and its prognostic efficacy was validated in the TCGA HNSCC test cohort, GSE41613, and GSE65858. Importantly, the high-risk group was characterized by a suppressive immune microenvironment, in contrast to the low-risk group. Our study successfully developed a robust TCRRG-based signature that accurately predicts clinical outcomes in HNSCC, offering valuable strategies for improved treatments.

 

摘要翻译: 

背景:基于预后差异对头颈部鳞状细胞癌(HNSCC)患者进行分层对治疗指导至关重要。本研究旨在构建一种基于T细胞受体相关基因(TCRRG)的预测特征,以评估HNSCC的临床结局。方法:我们从癌症基因组图谱(TCGA)HNSCC数据集、GSE41613和GSE65858数据集中获取基因表达谱。通过一致性聚类分析,我们根据TCRRG表达识别出两个不同的HNSCC亚群。随后,我们开发了一种基于TCRRG的特征,并在多个独立的HNSCC队列中进行了验证。此外,我们基于TCRRG建立了列线图模型,并进一步探讨了高风险组与低风险组之间免疫景观的差异。结果:TCGA HNSCC数据集被分为两个亚群,显示出总生存期(OS)和免疫细胞浸润的显著差异。此外,我们利用TCGA HNSCC训练队列开发了一种基于TCRRG的稳健预后特征,并在TCGA HNSCC测试队列、GSE41613和GSE65858中验证了其预后效能。重要的是,与低风险组相比,高风险组表现出抑制性免疫微环境特征。本研究成功开发了一种稳健的基于TCRRG的特征,能够准确预测HNSCC的临床结局,为改善治疗提供了有价值的策略。

 

原文链接:

Constructing a T-Cell Receptor-Related Gene Signature for Prognostic Stratification and Therapeutic Guidance in Head and Neck Squamous Cell Carcinoma

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